HL_4LNT_053

3D structure

PDB id

4LNT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.94 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4LNT_053 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.2083

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.4

Basepair signature

cWW-F

Number of instances in this motif group

18

Unit IDs

4LNT|1|RA|C|544
4LNT|1|RA|G|545
4LNT|1|RA|C|546
4LNT|1|RA|A|547
4LNT|1|RA|A|548
4LNT|1|RA|G|549

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RN

50S ribosomal protein L13

Chain RV

50S ribosomal protein L21