HL_4LNT_172

3D structure

PDB id

4LNT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.94 Å

Loop

Sequence

GGAACAAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4LNT_172 not in the Motif Atlas

Homologous match to HL_7RQB_028

Geometric discrepancy: 0.0697

The information below is about HL_7RQB_028

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64430.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

13

Unit IDs

4LNT|1|YA|G|978
4LNT|1|YA|G|979
4LNT|1|YA|A|980
4LNT|1|YA|A|981
4LNT|1|YA|C|982
4LNT|1|YA|A|983
4LNT|1|YA|A|984
4LNT|1|YA|C|985

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y3

50S ribosomal protein L30

Chain YU

50S ribosomal protein L20