HL_4LNT_173

3D structure

PDB id

4LNT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.94 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

4LNT|1|YA|A|1070

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4LNT_173 not in the Motif Atlas

Homologous match to HL_5J7L_161

Geometric discrepancy: 0.3733

The information below is about HL_5J7L_161

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19210.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

4LNT|1|YA|C|1064
4LNT|1|YA|U|1065
4LNT|1|YA|U|1066
4LNT|1|YA|A|1067
4LNT|1|YA|G|1068
4LNT|1|YA|A|1069
4LNT|1|YA|A|1070
4LNT|1|YA|G|1071
4LNT|1|YA|C|1072
4LNT|1|YA|A|1073
4LNT|1|YA|G|1074

Current chains

Chain YA

23S rRNA

Nearby chains