HL_4LNT_197

3D structure

PDB id

4LNT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.94 Å

Loop

Sequence

CUCCGG

Length

6 nucleotides

Bulged bases

4LNT|1|YA|C|2145, 4LNT|1|YA|C|2146

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4LNT_197 not in the Motif Atlas

Homologous match to HL_3U4M_001

Geometric discrepancy: 0.3276

The information below is about HL_3U4M_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

4LNT|1|YA|C|2143
4LNT|1|YA|U|2144
4LNT|1|YA|C|2145
4LNT|1|YA|C|2146
4LNT|1|YA|G|2147
4LNT|1|YA|G|2148

Current chains

Chain YA

23S rRNA

Nearby chains

Chain QA

Small subunit ribosomal RNA; SSU rRNA

Chain XK

30S ribosomal protein S11