HL_4LNT_210

3D structure

PDB id

4LNT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.94 Å

Loop

Sequence

CGAGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4LNT_210 not in the Motif Atlas

Geometric match to HL_4V9F_066

Geometric discrepancy: 0.0897

The information below is about HL_4V9F_066

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

4LNT|1|YA|C|2658
4LNT|1|YA|G|2659
4LNT|1|YA|A|2660
4LNT|1|YA|G|2661
4LNT|1|YA|A|2662
4LNT|1|YA|G|2663

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YH

50S ribosomal protein L6