HL_4LNT_214

3D structure

PDB id

4LNT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.94 Å

Loop

Sequence

GAAGACCAC

Length

9 nucleotides

Bulged bases

4LNT|1|YA|A|2820

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4LNT_214 not in the Motif Atlas

Homologous match to HL_7RQB_068

Geometric discrepancy: 0.0507

The information below is about HL_7RQB_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.1

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

4LNT|1|YA|G|2819
4LNT|1|YA|A|2820
4LNT|1|YA|A|2821
4LNT|1|YA|G|2822
4LNT|1|YA|A|2823
4LNT|1|YA|C|2824
4LNT|1|YA|C|2825
4LNT|1|YA|A|2826
4LNT|1|YA|C|2827

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YE

50S ribosomal protein L3

Chain YR

50S ribosomal protein L17