3D structure

PDB id
4LNT (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
2.94 Å

Loop

Sequence
CCUUGG
Length
6 nucleotides
Bulged bases
4LNT|1|QA|U|189, 4LNT|1|QA|G|190
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4LNT_218 not in the Motif Atlas
Homologous match to HL_4LFB_004
Geometric discrepancy: 0.2482
The information below is about HL_4LFB_004
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_48417.4
Basepair signature
cWW-F-F
Number of instances in this motif group
28

Unit IDs

4LNT|1|QA|C|186|||F
4LNT|1|QA|C|187
4LNT|1|QA|U|188
4LNT|1|QA|U|189
4LNT|1|QA|G|190
4LNT|1|QA|G|191|||A

Current chains

Chain QA
16S rRNA

Nearby chains

Chain QQ
30S ribosomal protein S17

Coloring options:


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