3D structure

PDB id
4LSK (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.48 Å

Loop

Sequence
CGUGAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4LSK_024 not in the Motif Atlas
Homologous match to HL_4LFB_024
Geometric discrepancy: 0.0996
The information below is about HL_4LFB_024
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_37824.7
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
349

Unit IDs

4LSK|1|QA|C|1076
4LSK|1|QA|G|1077
4LSK|1|QA|U|1078
4LSK|1|QA|G|1079
4LSK|1|QA|A|1080
4LSK|1|QA|G|1081

Current chains

Chain QA
16S rRNA

Nearby chains

Chain QB
30S ribosomal protein S2
Chain QE
30S ribosomal protein S5

Coloring options:


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