3D structure

PDB id
4LSK (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.48 Å

Loop

Sequence
GAAACAUC
Length
8 nucleotides
Bulged bases
4LSK|1|RA|A|196
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4LSK_042 not in the Motif Atlas
Geometric match to HL_5J7L_139
Geometric discrepancy: 0.0881
The information below is about HL_5J7L_139
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_30068.2
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
15

Unit IDs

4LSK|1|RA|G|194
4LSK|1|RA|A|195
4LSK|1|RA|A|196
4LSK|1|RA|A|197
4LSK|1|RA|C|198
4LSK|1|RA|A|199
4LSK|1|RA|U|200
4LSK|1|RA|C|201

Current chains

Chain RA
23S rRNA

Nearby chains

Chain R1
50S ribosomal protein L28
Chain RP
50S ribosomal protein L15

Coloring options:


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