3D structure

PDB id
4LSK (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.48 Å

Loop

Sequence
CGCGAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4LSK_106 not in the Motif Atlas
Homologous match to HL_7RQB_069
Geometric discrepancy: 0.0759
The information below is about HL_7RQB_069
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_35490.2
Basepair signature
cWW-tSH-F-F
Number of instances in this motif group
299

Unit IDs

4LSK|1|RA|C|2856
4LSK|1|RA|G|2857
4LSK|1|RA|C|2858
4LSK|1|RA|G|2859
4LSK|1|RA|A|2860
4LSK|1|RA|G|2861

Current chains

Chain RA
23S rRNA

Nearby chains

Chain RT
50S ribosomal protein L19

Coloring options:


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