HL_4LSK_130

3D structure

PDB id

4LSK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.48 Å

Loop

Sequence

UGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4LSK_130 not in the Motif Atlas

Homologous match to HL_4LFB_022

Geometric discrepancy: 0.113

The information below is about HL_4LFB_022

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

4LSK|1|XA|U|1012
4LSK|1|XA|G|1013
4LSK|1|XA|A|1014
4LSK|1|XA|A|1015
4LSK|1|XA|A|1016
4LSK|1|XA|G|1017

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XN

30S ribosomal protein S14

Chain XS

30S ribosomal protein S19