HL_4LSK_144
3D structure
- PDB id
- 4LSK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.48 Å
Loop
- Sequence
- GUUCGG(1MG)AC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 1MG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4LSK_144 not in the Motif Atlas
- Geometric match to HL_3TUP_002
- Geometric discrepancy: 0.1802
- The information below is about HL_3TUP_002
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
4LSK|1|XY|G|31
4LSK|1|XY|U|32
4LSK|1|XY|U|33
4LSK|1|XY|C|34
4LSK|1|XY|G|35
4LSK|1|XY|G|36
4LSK|1|XY|1MG|37
4LSK|1|XY|A|38
4LSK|1|XY|C|39
Current chains
- Chain XY
- messenger RNA
Nearby chains
- Chain XA
- Small subunit ribosomal RNA; SSU rRNA
- Chain XL
- 30S ribosomal protein S12
- Chain XM
- 30S ribosomal protein S13
- Chain XX
- A-site ASL SufA6
- Chain YA
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: