HL_4LSK_158

3D structure

PDB id

4LSK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.48 Å

Loop

Sequence

GGACCACC

Length

8 nucleotides

Bulged bases

4LSK|1|YA|G|411

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4LSK_158 not in the Motif Atlas

Homologous match to HL_7RQB_014

Geometric discrepancy: 0.0921

The information below is about HL_7RQB_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_96598.1

Basepair signature

cWW

Number of instances in this motif group

15

Unit IDs

4LSK|1|YA|G|410
4LSK|1|YA|G|411
4LSK|1|YA|A|412
4LSK|1|YA|C|413
4LSK|1|YA|C|414
4LSK|1|YA|A|415
4LSK|1|YA|C|416
4LSK|1|YA|C|417

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YP

50S ribosomal protein L15