3D structure

PDB id
4LSK (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.48 Å

Loop

Sequence
CGCAAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4LSK_161 not in the Motif Atlas
Geometric match to HL_4C7O_001
Geometric discrepancy: 0.3042
The information below is about HL_4C7O_001
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_37824.8
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
352

Unit IDs

4LSK|1|YA|C|544
4LSK|1|YA|G|545
4LSK|1|YA|C|546
4LSK|1|YA|A|547
4LSK|1|YA|A|548
4LSK|1|YA|G|549

Current chains

Chain YA
23S rRNA

Nearby chains

Chain YN
50S ribosomal protein L13
Chain YV
50S ribosomal protein L21

Coloring options:


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