HL_4LSK_175

3D structure

PDB id

4LSK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.48 Å

Loop

Sequence

GGAUGAC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4LSK_175 not in the Motif Atlas

Geometric match to HL_5U30_001

Geometric discrepancy: 0.3879

The information below is about HL_5U30_001

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

4LSK|1|YA|G|1171
4LSK|1|YA|G|1173
4LSK|1|YA|A|1174
4LSK|1|YA|U|1175
4LSK|1|YA|G|1176
4LSK|1|YA|A|1177
4LSK|1|YA|C|1178

Current chains

Chain YA

23S rRNA

Nearby chains