HL_4LT8_092

3D structure

PDB id

4LT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.14 Å

Loop

Sequence

GGACGGAAAUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4LT8_092 not in the Motif Atlas

Homologous match to HL_7RQB_055

Geometric discrepancy: 0.2733

The information below is about HL_7RQB_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11805.3

Basepair signature

cWW-F-F-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

4LT8|1|RA|G|2303
4LT8|1|RA|G|2304
4LT8|1|RA|A|2305
4LT8|1|RA|C|2306
4LT8|1|RA|G|2307
4LT8|1|RA|G|2308
4LT8|1|RA|A|2309
4LT8|1|RA|A|2310
4LT8|1|RA|A|2311
4LT8|1|RA|U|2312
4LT8|1|RA|C|2313

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RG

50S ribosomal protein L5