HL_4NLF_001

3D structure

PDB id

4NLF (explore in PDB, NAKB, or RNA 3D Hub)

Description

2'-trifluoromethylthio-2'-deoxycytidine-modified SRL

Experimental method

X-RAY DIFFRACTION

Resolution

1 Å

Loop

Sequence

CGAGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_85603.1

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

304

Unit IDs

4NLF|1|A|C|2658
4NLF|1|A|G|2659
4NLF|1|A|A|2660
4NLF|1|A|G|2661
4NLF|1|A|A|2662
4NLF|1|A|G|2663

Current chains

Chain A

23S ribosomal RNA Sarcin Ricin Loop

Nearby chains