HL_4NVV_011

3D structure

PDB id

4NVV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUGAAAGCC

Length

9 nucleotides

Bulged bases

4NVV|1|A|G|353, 4NVV|1|A|A|354, 4NVV|1|A|A|355

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_68081.6

Basepair signature

cWW-R-R-tWH-R-R

Number of instances in this motif group

13

Unit IDs

4NVV|1|A|G|351
4NVV|1|A|U|352
4NVV|1|A|G|353
4NVV|1|A|A|354
4NVV|1|A|A|355
4NVV|1|A|A|356
4NVV|1|A|G|357
4NVV|1|A|C|358
4NVV|1|A|C|359

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain F

50S Ribosomal Protein L4

Chain Y

50S Ribosomal Protein L24