HL_4NVV_017

3D structure

PDB id

4NVV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UAUUGAAGCA

Length

10 nucleotides

Bulged bases

4NVV|1|A|C|597

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_72498.15

Basepair signature

cWW-tWH-R-R-R

Number of instances in this motif group

76

Unit IDs

4NVV|1|A|U|589
4NVV|1|A|A|590
4NVV|1|A|U|591
4NVV|1|A|U|592
4NVV|1|A|G|593
4NVV|1|A|A|594
4NVV|1|A|A|595
4NVV|1|A|G|596
4NVV|1|A|C|597
4NVV|1|A|A|598

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain 5

50S Ribosomal Protein L32

Chain E

50S Ribosomal Protein L3

Chain P

50S Ribosomal Protein L15

Chain V

50S Ribosomal Protein L21