HL_4NVV_043

3D structure

PDB id

4NVV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UUUACCAAAAA

Length

11 nucleotides

Bulged bases

4NVV|1|A|A|1811, 4NVV|1|A|C|1812, 4NVV|1|A|C|1813, 4NVV|1|A|A|1817

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_85534.4

Basepair signature

cWW-tWH-tWH-R

Number of instances in this motif group

9

Unit IDs

4NVV|1|A|U|1808
4NVV|1|A|U|1809
4NVV|1|A|U|1810
4NVV|1|A|A|1811
4NVV|1|A|C|1812
4NVV|1|A|C|1813
4NVV|1|A|A|1814
4NVV|1|A|A|1815
4NVV|1|A|A|1816
4NVV|1|A|A|1817
4NVV|1|A|A|1818

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain 7

50S Ribosomal Protein L34

Chain D

50S Ribosomal Protein L2

Chain W

50S Ribosomal Protein L22