HL_4NXN_002
3D structure
- PDB id
- 4NXN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of the 30S ribosomal subunit from a GidB (RsmG) mutant of Thermus thermophilus (HB8), bound with streptomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.54 Å
Loop
- Sequence
- GGUUUUACU
- Length
- 9 nucleotides
- Bulged bases
- 4NXN|1|A|U|81
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4NXN_002 not in the Motif Atlas
- Geometric match to HL_8H1B_001
- Geometric discrepancy: 0.2556
- The information below is about HL_8H1B_001
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_10453.3
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
4NXN|1|A|G|79
4NXN|1|A|G|80
4NXN|1|A|U|81
4NXN|1|A|U|82
4NXN|1|A|U|83
4NXN|1|A|U|84
4NXN|1|A|A|88
4NXN|1|A|C|89
4NXN|1|A|U|90
Current chains
- Chain A
- 16S rRNA
Nearby chains
No other chains within 10ÅColoring options: