HL_4P6F_225

3D structure

PDB id

4P6F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the peptolide 12C bound to bacterial ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

UUCGUGGAG

Length

9 nucleotides

Bulged bases

4P6F|1|RA|G|386, 4P6F|1|RA|G|389

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4P6F|1|RA|U|383
4P6F|1|RA|U|384
4P6F|1|RA|C|385
4P6F|1|RA|G|386
4P6F|1|RA|U|387
4P6F|1|RA|G|388
4P6F|1|RA|G|389
4P6F|1|RA|A|390
4P6F|1|RA|G|391

Current chains

Chain RA

23S ribosomal RNA

Nearby chains

Chain R1

50S ribosomal protein L28

Chain RP

50S ribosomal protein L15