3D structure

PDB id
4P70 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.68 Å

Loop

Sequence
GUUCGUGGAGC
Length
11 nucleotides
Bulged bases
4P70|1|RA|G|386
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4P70_048 not in the Motif Atlas
Homologous match to HL_7RQB_013
Geometric discrepancy: 0.1412
The information below is about HL_7RQB_013
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_91503.4
Basepair signature
cWW-F-F-F-F-F-F-F
Number of instances in this motif group
4

Unit IDs

4P70|1|RA|G|382
4P70|1|RA|U|383
4P70|1|RA|U|384
4P70|1|RA|C|385
4P70|1|RA|G|386
4P70|1|RA|U|387
4P70|1|RA|G|388
4P70|1|RA|G|389
4P70|1|RA|A|390
4P70|1|RA|G|391
4P70|1|RA|C|392

Current chains

Chain RA
23S rRNA

Nearby chains

Chain R1
50S ribosomal protein L28
Chain RP
50S ribosomal protein L15

Coloring options:


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