HL_4P70_071

3D structure

PDB id

4P70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

4P70|1|RA|U|1396, 4P70|1|RA|U|1397

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4P70_071 not in the Motif Atlas

Homologous match to HL_7RQB_036

Geometric discrepancy: 0.1461

The information below is about HL_7RQB_036

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69023.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

4P70|1|RA|G|1389
4P70|1|RA|U|1390
4P70|1|RA|U|1391
4P70|1|RA|A|1392
4P70|1|RA|A|1393
4P70|1|RA|U|1394
4P70|1|RA|A|1395
4P70|1|RA|U|1396
4P70|1|RA|U|1397
4P70|1|RA|C|1398

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RX

50S ribosomal protein L23