HL_4P70_078

3D structure

PDB id

4P70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

4P70|1|RA|U|1693

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4P70_078 not in the Motif Atlas

Geometric match to HL_4LFB_011

Geometric discrepancy: 0.1509

The information below is about HL_4LFB_011

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

49

Unit IDs

4P70|1|RA|C|1691
4P70|1|RA|U|1692
4P70|1|RA|U|1693
4P70|1|RA|C|1694
4P70|1|RA|G|1695
4P70|1|RA|G|1696

Current chains

Chain RA

23S rRNA

Nearby chains

Chain QA

Small subunit ribosomal RNA; SSU rRNA

Chain RD

50S ribosomal protein L2