3D structure

PDB id
4P70 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.68 Å

Loop

Sequence
GGGAACAACC
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4P70_222 not in the Motif Atlas
Geometric match to HL_1KH6_003
Geometric discrepancy: 0.2157
The information below is about HL_1KH6_003
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_33487.1
Basepair signature
cWW-cWW
Number of instances in this motif group
2

Unit IDs

4P70|1|RA|G|977
4P70|1|RA|G|978
4P70|1|RA|G|979
4P70|1|RA|A|980
4P70|1|RA|A|981
4P70|1|RA|C|982
4P70|1|RA|A|983
4P70|1|RA|A|984
4P70|1|RA|C|985
4P70|1|RA|C|986

Current chains

Chain RA
23S rRNA

Nearby chains

Chain R3
50S ribosomal protein L30
Chain RB
5S ribosomal RNA; 5S rRNA
Chain RU
50S ribosomal protein L20

Coloring options:


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