HL_4P70_223

3D structure

PDB id

4P70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

GGGAUGACC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4P70_223 not in the Motif Atlas

Geometric match to HL_1KH6_003

Geometric discrepancy: 0.2598

The information below is about HL_1KH6_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33487.1

Basepair signature

cWW-cWW

Number of instances in this motif group

2

Unit IDs

4P70|1|RA|G|1170
4P70|1|RA|G|1171
4P70|1|RA|G|1173
4P70|1|RA|A|1174
4P70|1|RA|U|1175
4P70|1|RA|G|1176
4P70|1|RA|A|1177
4P70|1|RA|C|1178
4P70|1|RA|C|1179

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RV

50S ribosomal protein L21