HL_4P8Z_001
3D structure
- PDB id
- 4P8Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Speciation of a group I intron into a lariat capping ribozyme
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.85 Å
Loop
- Sequence
- GCUAAUCAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_59710.2
- Basepair signature
- cWW-bif-R-R-R-R-R
- Number of instances in this motif group
- 31
Unit IDs
4P8Z|1|A|G|23
4P8Z|1|A|C|24
4P8Z|1|A|U|25
4P8Z|1|A|A|26
4P8Z|1|A|A|27
4P8Z|1|A|U|28
4P8Z|1|A|C|29
4P8Z|1|A|A|30
4P8Z|1|A|C|31
Current chains
- Chain A
- Didymium iridis partial IGS, 18S rRNA gene, I-DirI gene and partial ITS1
Nearby chains
No other chains within 10ÅColoring options: