3D structure

PDB id
4P95 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Speciation of a group I intron into a lariat capping ribozyme (Circularly permutated ribozyme)
Experimental method
X-RAY DIFFRACTION
Resolution
2.5 Å

Loop

Sequence
GGACGAUC
Length
8 nucleotides
Bulged bases
4P95|1|A|A|297
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_49194.1
Basepair signature
cWW-R-R-R-R
Number of instances in this motif group
1

Unit IDs

4P95|1|A|G|295
4P95|1|A|G|296
4P95|1|A|A|297
4P95|1|A|C|298
4P95|1|A|G|299
4P95|1|A|A|300
4P95|1|A|U|301
4P95|1|A|C|302

Current chains

Chain A
RNA (192-MER)

Nearby chains

No other chains within 10Å

Coloring options:

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