3D structure

PDB id
4P95 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Speciation of a group I intron into a lariat capping ribozyme (Circularly permutated ribozyme)
Experimental method
X-RAY DIFFRACTION
Resolution
2.5 Å

Loop

Sequence
CGAAAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_43074.17
Basepair signature
cWW-tSH-R-R
Number of instances in this motif group
257

Unit IDs

4P95|1|A|C|567
4P95|1|A|G|568
4P95|1|A|A|569
4P95|1|A|A|570
4P95|1|A|A|571
4P95|1|A|G|572

Current chains

Chain A
RNA (192-MER)

Nearby chains

No other chains within 10Å

Coloring options:

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