HL_4TUA_080

3D structure

PDB id

4TUA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ASL-Thr bound to Codon ACC-A on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

4TUA|1|RA|U|1693

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4TUA_080 not in the Motif Atlas

Geometric match to HL_4LFB_009

Geometric discrepancy: 0.1099

The information below is about HL_4LFB_009

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

49

Unit IDs

4TUA|1|RA|C|1691
4TUA|1|RA|U|1692
4TUA|1|RA|U|1693
4TUA|1|RA|C|1694
4TUA|1|RA|G|1695
4TUA|1|RA|G|1696

Current chains

Chain RA

23S rRNA

Nearby chains

Chain QA

Small subunit ribosomal RNA; SSU rRNA

Chain RD

50S ribosomal protein L2