HL_4TUA_117

3D structure

PDB id

4TUA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ASL-Thr bound to Codon ACC-A on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CACUGAGACACGGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4TUA_117 not in the Motif Atlas

Homologous match to HL_4LFB_008

Geometric discrepancy: 0.0845

The information below is about HL_4LFB_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.3

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

4TUA|1|XA|C|320
4TUA|1|XA|A|321
4TUA|1|XA|C|322
4TUA|1|XA|U|323
4TUA|1|XA|G|324
4TUA|1|XA|A|325
4TUA|1|XA|G|326
4TUA|1|XA|A|327
4TUA|1|XA|C|328
4TUA|1|XA|A|329
4TUA|1|XA|C|330
4TUA|1|XA|G|331
4TUA|1|XA|G|332
4TUA|1|XA|G|333

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XP

30S ribosomal protein S16

Chain XT

30S ribosomal protein S20