HL_4TUC_104

3D structure

PDB id

4TUC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CGUCAAG

Length

7 nucleotides

Bulged bases

4TUC|1|RA|U|2797, 4TUC|1|RA|C|2798

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4TUC_104 not in the Motif Atlas

Geometric match to HL_1P6V_001

Geometric discrepancy: 0.3654

The information below is about HL_1P6V_001

Detailed Annotation

Other HL

Broad Annotation

Other HL

Motif group

HL_45036.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

4TUC|1|RA|C|2794
4TUC|1|RA|G|2795
4TUC|1|RA|U|2797
4TUC|1|RA|C|2798
4TUC|1|RA|A|2799
4TUC|1|RA|A|2801
4TUC|1|RA|G|2802

Current chains

Chain RA

23S rRNA

Nearby chains