3D structure

PDB id
4TUC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.6 Å

Loop

Sequence
CGUGUGGAAG
Length
10 nucleotides
Bulged bases
4TUC|1|YA|U|2406
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4TUC_205 not in the Motif Atlas
Homologous match to HL_7RQB_059
Geometric discrepancy: 0.078
The information below is about HL_7RQB_059
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_40210.2
Basepair signature
cWW-tSH-F
Number of instances in this motif group
12

Unit IDs

4TUC|1|YA|C|2404
4TUC|1|YA|G|2405
4TUC|1|YA|U|2406
4TUC|1|YA|G|2407
4TUC|1|YA|U|2408
4TUC|1|YA|G|2409
4TUC|1|YA|G|2410
4TUC|1|YA|A|2411
4TUC|1|YA|A|2412
4TUC|1|YA|G|2413

Current chains

Chain YA
23S rRNA

Nearby chains

Chain Y1
50S ribosomal protein L28
Chain YP
50S ribosomal protein L15

Coloring options:


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