3D structure

PDB id
4TUC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.6 Å

Loop

Sequence
CGUGAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4TUC_209 not in the Motif Atlas
Homologous match to HL_7RQB_063
Geometric discrepancy: 0.0729
The information below is about HL_7RQB_063
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_35490.2
Basepair signature
cWW-tSH-F-F
Number of instances in this motif group
299

Unit IDs

4TUC|1|YA|C|2594
4TUC|1|YA|G|2595
4TUC|1|YA|U|2596
4TUC|1|YA|G|2597
4TUC|1|YA|A|2598
4TUC|1|YA|G|2599

Current chains

Chain YA
23S rRNA

Nearby chains

Chain XV
Transfer RNA; tRNA
Chain YD
50S ribosomal protein L2

Coloring options:


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