HL_4TUD_134

3D structure

PDB id

4TUD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ASL-SufJ bound to Codon ACC-C on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

GUUCGGC

Length

7 nucleotides

Bulged bases

4TUD|1|XA|U|1136

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4TUD_134 not in the Motif Atlas

Homologous match to HL_6CZR_097

Geometric discrepancy: 0.2313

The information below is about HL_6CZR_097

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4TUD|1|XA|G|1134
4TUD|1|XA|U|1135
4TUD|1|XA|U|1136
4TUD|1|XA|C|1137
4TUD|1|XA|G|1138
4TUD|1|XA|G|1139
4TUD|1|XA|C|1140

Current chains

Chain XA

16S rRNA

Nearby chains