3D structure

PDB id
4TUE (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of ASL-SufJ bound to Codon ACC-U on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.5 Å

Loop

Sequence
CUGGGGCGG
Length
9 nucleotides
Bulged bases
4TUE|1|RA|G|2250
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4TUE_090 not in the Motif Atlas
Homologous match to HL_7RQB_053
Geometric discrepancy: 0.1072
The information below is about HL_7RQB_053
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4TUE|1|RA|C|2248
4TUE|1|RA|U|2249
4TUE|1|RA|G|2250
4TUE|1|RA|G|2251
4TUE|1|RA|G|2252
4TUE|1|RA|G|2253
4TUE|1|RA|C|2254
4TUE|1|RA|G|2255
4TUE|1|RA|G|2256

Current chains

Chain RA
23S rRNA

Nearby chains

Chain QV
Transfer RNA; tRNA
Chain R0
50S ribosomal protein L27
Chain RQ
50S ribosomal protein L16

Coloring options:


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