HL_4TUX_002

3D structure

PDB id

4TUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

drosophila stem-loop binding protein complexed with histone mRNA stem-loop

Experimental method

X-RAY DIFFRACTION

Resolution

3.08 Å

Loop

Sequence

UUUUCA

Length

6 nucleotides

Bulged bases

4TUX|1|D|U|15, 4TUX|1|D|C|17

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4TUX_002 not in the Motif Atlas

Geometric match to HL_4TUW_002

Geometric discrepancy: 0.1437

The information below is about HL_4TUW_002

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_12626.1

Basepair signature

cWW-F

Number of instances in this motif group

12

Unit IDs

4TUX|1|D|U|13
4TUX|1|D|U|14
4TUX|1|D|U|15
4TUX|1|D|U|16
4TUX|1|D|C|17
4TUX|1|D|A|18

Current chains

Chain D

RNA (26-MER)

Nearby chains

Chain A

Histone RNA hairpin-binding protein

Chain B

Histone RNA hairpin-binding protein

Chain C

RNA (26-MER)