HL_4TZX_003

3D structure

PDB id

4TZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Vibrio Vulnificus Adenine Riboswitch variant, grown in Mg2+

Experimental method

X-RAY DIFFRACTION

Resolution

2.01 Å

Loop

Sequence

GCCUUAAAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_66174.4

Basepair signature

cWW-R-cSW-R-cSH

Number of instances in this motif group

7

Unit IDs

4TZX|1|X|G|59
4TZX|1|X|C|60
4TZX|1|X|C|61
4TZX|1|X|U|62
4TZX|1|X|U|63
4TZX|1|X|A|64
4TZX|1|X|A|65
4TZX|1|X|A|66
4TZX|1|X|C|67

Current chains

Chain X

Vibrio vulnificus Adenine Riboswitch

Nearby chains