HL_4U1U_126

3D structure

PDB id

4U1U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to quinupristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.95 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

4U1U|1|CA|U|1029, 4U1U|1|CA|U|1030, 4U1U|1|CA|C|1031, 4U1U|1|CA|G|1032

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U1U|1|CA|C|1028
4U1U|1|CA|U|1029
4U1U|1|CA|U|1030
4U1U|1|CA|C|1031
4U1U|1|CA|G|1032
4U1U|1|CA|G|1033

Current chains

Chain CA

16S rRNA

Nearby chains

Chain AG

30S ribosomal protein S7

Chain BA

Large subunit ribosomal RNA; LSU rRNA