HL_4U1V_013

3D structure

PDB id

4U1V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to linopristin.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CAGCCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4U1V_013 not in the Motif Atlas

Geometric match to HL_5J7L_143

Geometric discrepancy: 0.2146

The information below is about HL_5J7L_143

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

4U1V|1|AA|C|522
4U1V|1|AA|A|523
4U1V|1|AA|G|524
4U1V|1|AA|C|525
4U1V|1|AA|C|526
4U1V|1|AA|G|527

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AL

30S ribosomal protein S12