3D structure

PDB id
4U1V (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the E. coli ribosome bound to linopristin.
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
CUACGG
Length
6 nucleotides
Bulged bases
4U1V|1|CA|A|344
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4U1V_112 not in the Motif Atlas
Homologous match to HL_4LFB_009
Geometric discrepancy: 0.1618
The information below is about HL_4LFB_009
Detailed Annotation
UNCG
Broad Annotation
No text annotation
Motif group
HL_34617.5
Basepair signature
cWW-tSW-F
Number of instances in this motif group
57

Unit IDs

4U1V|1|CA|C|342
4U1V|1|CA|U|343
4U1V|1|CA|A|344
4U1V|1|CA|C|345
4U1V|1|CA|G|346
4U1V|1|CA|G|347

Current chains

Chain CA
16S rRNA

Nearby chains

Chain DK
50S ribosomal protein L14
Chain DP
50S ribosomal protein L19

Coloring options:


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