HL_4U1V_143

3D structure

PDB id

4U1V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to linopristin.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGGCGAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4U1V_143 not in the Motif Atlas

Homologous match to HL_4WF9_008

Geometric discrepancy: 0.1501

The information below is about HL_4WF9_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37369.2

Basepair signature

cWW-tSH-F-F-F

Number of instances in this motif group

9

Unit IDs

4U1V|1|DA|C|246
4U1V|1|DA|G|247
4U1V|1|DA|G|248
4U1V|1|DA|C|249
4U1V|1|DA|G|250
4U1V|1|DA|A|251
4U1V|1|DA|G|252

Current chains

Chain DA

23S rRNA

Nearby chains

Chain D3

50S ribosomal protein L35

Chain DL

50S ribosomal protein L15