HL_4U1V_199

3D structure

PDB id

4U1V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to linopristin.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGAGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4U1V_199 not in the Motif Atlas

Geometric match to HL_4LFB_027

Geometric discrepancy: 0.1367

The information below is about HL_4LFB_027

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

4U1V|1|DA|C|2658
4U1V|1|DA|G|2659
4U1V|1|DA|A|2660
4U1V|1|DA|G|2661
4U1V|1|DA|A|2662
4U1V|1|DA|G|2663

Current chains

Chain DA

23S rRNA

Nearby chains

Chain DG

50S ribosomal protein L6