HL_4U1V_212

3D structure

PDB id

4U1V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to linopristin.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUUUGAAGUGUGGACGCCAGUCUGCAUGGAG

Length

31 nucleotides

Bulged bases

4U1V|1|BA|U|2132, 4U1V|1|BA|C|2145

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U1V|1|BA|C|2129
4U1V|1|BA|U|2130
4U1V|1|BA|U|2131
4U1V|1|BA|U|2132
4U1V|1|BA|G|2133
4U1V|1|BA|A|2134
4U1V|1|BA|A|2135
4U1V|1|BA|G|2136
4U1V|1|BA|U|2137
4U1V|1|BA|G|2138
4U1V|1|BA|U|2139
4U1V|1|BA|G|2140
4U1V|1|BA|G|2141
4U1V|1|BA|A|2142
4U1V|1|BA|C|2143
4U1V|1|BA|G|2144
4U1V|1|BA|C|2145
4U1V|1|BA|C|2146
4U1V|1|BA|A|2147
4U1V|1|BA|G|2148
4U1V|1|BA|U|2149
4U1V|1|BA|C|2150
4U1V|1|BA|U|2151
4U1V|1|BA|G|2152
4U1V|1|BA|C|2153
4U1V|1|BA|A|2154
4U1V|1|BA|U|2155
4U1V|1|BA|G|2156
4U1V|1|BA|G|2157
4U1V|1|BA|A|2158
4U1V|1|BA|G|2159

Current chains

Chain BA

23S rRNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain AK

30S ribosomal protein S11

Chain B5

50S ribosomal protein L1

Chain CA

Small subunit ribosomal RNA; SSU rRNA