HL_4U20_213

3D structure

PDB id

4U20 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to flopristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GUGGACGCCAGUCUGC

Length

16 nucleotides

Bulged bases

4U20|1|BA|C|2145

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U20|1|BA|G|2138
4U20|1|BA|U|2139
4U20|1|BA|G|2140
4U20|1|BA|G|2141
4U20|1|BA|A|2142
4U20|1|BA|C|2143
4U20|1|BA|G|2144
4U20|1|BA|C|2145
4U20|1|BA|C|2146
4U20|1|BA|A|2147
4U20|1|BA|G|2148
4U20|1|BA|U|2149
4U20|1|BA|C|2150
4U20|1|BA|U|2151
4U20|1|BA|G|2152
4U20|1|BA|C|2153

Current chains

Chain BA

23S rRNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain AK

30S ribosomal protein S11