HL_4U20_218

3D structure

PDB id

4U20 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to flopristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UUAACCGAAUAGGGGAG

Length

17 nucleotides

Bulged bases

4U20|1|DA|A|613, 4U20|1|DA|U|615

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U20|1|DA|U|606
4U20|1|DA|U|607
4U20|1|DA|A|608
4U20|1|DA|A|609
4U20|1|DA|C|610
4U20|1|DA|C|611
4U20|1|DA|G|612
4U20|1|DA|A|613
4U20|1|DA|A|614
4U20|1|DA|U|615
4U20|1|DA|A|616
4U20|1|DA|G|617
4U20|1|DA|G|618
4U20|1|DA|G|619
4U20|1|DA|G|620
4U20|1|DA|A|621
4U20|1|DA|G|622

Current chains

Chain DA

23S rRNA

Nearby chains

Chain DE

50S ribosomal protein L4

Chain DL

50S ribosomal protein L15