HL_4U25_018

3D structure

PDB id

4U25 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to virginiamycin M1.

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CCUUGAG

Length

7 nucleotides

Bulged bases

4U25|1|AA|U|842

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U25|1|AA|C|840
4U25|1|AA|C|841
4U25|1|AA|U|842
4U25|1|AA|U|843
4U25|1|AA|G|844
4U25|1|AA|A|845
4U25|1|AA|G|846

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AR

30S ribosomal protein S18

Chain CB

30S ribosomal protein S2