HL_4U25_060

3D structure

PDB id

4U25 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to virginiamycin M1.

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GGCUUAGAAGCAGCC

Length

15 nucleotides

Bulged bases

4U25|1|BA|A|1070, 4U25|1|BA|G|1071, 4U25|1|BA|C|1072

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U25|1|BA|G|1062
4U25|1|BA|G|1063
4U25|1|BA|C|1064
4U25|1|BA|U|1065
4U25|1|BA|U|1066
4U25|1|BA|A|1067
4U25|1|BA|G|1068
4U25|1|BA|A|1069
4U25|1|BA|A|1070
4U25|1|BA|G|1071
4U25|1|BA|C|1072
4U25|1|BA|A|1073
4U25|1|BA|G|1074
4U25|1|BA|C|1075
4U25|1|BA|C|1076

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BI

50S ribosomal protein L11