HL_4U25_062

3D structure

PDB id

4U25 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to virginiamycin M1.

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GACGCUUAUGCGUU

Length

14 nucleotides

Bulged bases

4U25|1|BA|U|1174, 4U25|1|BA|A|1175

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U25|1|BA|G|1168
4U25|1|BA|A|1169
4U25|1|BA|C|1170
4U25|1|BA|G|1171
4U25|1|BA|C|1172
4U25|1|BA|U|1173
4U25|1|BA|U|1174
4U25|1|BA|A|1175
4U25|1|BA|U|1176
4U25|1|BA|G|1177
4U25|1|BA|C|1178
4U25|1|BA|G|1179
4U25|1|BA|U|1180
4U25|1|BA|U|1181

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BR

50S ribosomal protein L21